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CABRI Guidelines for Catalogue Production

Guidelines prepared for CABRI by BCCM, CBS, CERDIC, DSMZ, ECACC, HGMP, INRC, MSDN
Page layout by CERDIC

Data input & authentication

Flat file preparation

Flat file submission

Data Sets

• Minimum Data Set, General Definition
• Minimum data set for plant cell lines
• Full data set

Data entry and validation

1. Scientific name

Field	Scientific name
Description	botanical name of initial plant
Input process	Reference Lists: - Taxonomic references: H. Melchior (ed.), "A. Engler’s Syllabus der Planzenfamilien" Gebrüder Bornträger, Berlin 1964
Required for	MDS

2. Family

Field	Family
Description	Family whose belong the initial plant
Input process	Reference Lists: - Taxonomic references: H. Melchior (ed.), "A. Engler’s Syllabus der Planzenfamilien" Gebrüder Bornträger, Berlin 1964
Required for	MDS

3. Accession number

Field	Accession number
Description	Collection Number given to the cell line
Input process	automatically given, to avoid duplicates or absence of identifier
Note	a CABRI accession number is given, but only for internal purposes
Required for	MDS

4. Strain designation

Field	Strain designation
Description	designations characterising the cell line
Input process	designations usually given by depositor or initiator
Required for	MDS

5. Depositor name and address

Field	Depositor name and address
Description	depositor name address of the Institution
Input process	CABRI agreed list for country: name based on country code file retrieved from: ftp://ftp.ripe.net/iso3166-countrycodes updated by the RIPE Network Co-ordination Centre, in co-ordination with the ISO 3166 Maintenance Agency at DIN Berlin. Exception for UK, USA, USSR, Netherlands, North Korea
Required for	MDS

6. Culture conditions

Field	Culture conditions
Description	- name of main cultivation medium (abbreviated) - recommended growth temperature (°C) - Humidity of growth chamber (%) - Light conditions (lux) - Light regime (hours)
Input process	Reference List: CABRI agreed list for abbreviated media: http://www.dsmz.de/media/media.htm
Required for	MDS

7. Release conditions/Restrictions

Field	Release conditions/Restrictions
Description	Release conditions/Restrictions patents
Input process	release conditions/restrictions: value "no", or a text field describing the appropriate restrictions: hazard group, import/export regulations, .. The text may contain codes which refer to text files explaining the restrictions in more detail. patents: EPO standard rules
Required for	MDS

8. Hazard/BioHazard

Field	Hazard/BioHazard
Description	hazard classification of the plant cell EU related hazard information rules country-specific related hazard information rules
Input process	See guidelines for Quality Management for Plant cell lines
Required for	MDS

9. Additional information

Field	Additional information
Description	any additional information about the cell line
Input process	Free text
Required for	MDS

10. Date of initiation

Field	Date of initiation
Description	date of culture initiation
Input process	Entered as dd.mm.yyyy
Required for	MDS

11. History

Field	History
Description	history of the cell line before arrival at the resource centre
Input process
Required for	MDS